BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B12SP1|AL428507
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1446 0.0
>3x_Contig1397
Length = 8011
Score = 1446 bits (718), Expect = 0.0
Identities = 769/800 (96%)
Strand = Plus / Plus
Query: 1 aactatcttcagagtgcgacgatgagttagaccaaaccaatgaaaaaacagaaagactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3424 aactatcttcagagtgcgacgatgagttagaccaaaccaatgaaaaaacagaaagactgt 3483
Query: 61 ttagtaagcttttatctctcaaaataattctttacaaaatttgaatttgcaaagtgacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 ttagtaagcttttatctctcaaaataattctttacaaaatttgaatttgcaaagtgacgc 3543
Query: 121 tcttcaatgaggtgggaacacgtcctatgataaaatccgtcaacaaaaatgttcgataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3544 tcttcaatgaggtgggaacacgtcctatgataaaatccgtcaacaaaaatgttcgataga 3603
Query: 181 attaatagctgaaattgtttctttaactccttcactctctaaactaagtagcaaaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3604 attaatagctgaaattgtttctttaactccttcactctctaaactaagtagcaaaaacta 3663
Query: 241 ggagaaaaagatccaaagacacgcagcggctttccaaaagaaaactaggacagataaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 ggagaaaaagatccaaagacacgcagcggctttccaaaagaaaactaggacagataaaac 3723
Query: 301 aggattatctaaccgaaaaccaacacagatccaactgaactgaatcaagtacaggaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3724 aggattatctaaccgaaaaccaacacagatccaactgaactgaatcaagtacaggaaatc 3783
Query: 361 cgaagaatattctgtatttcaaatcaaataaaaccaactcacaaacaccgtttattaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3784 cgaagaatattctgtatttcaaatcaaataaaaccaactcacaaacaccgtttattaaac 3843
Query: 421 aagtgatggatggtggattaanaaadaaagawaaadagatgagggaaaagaggatgatat 480
||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 3844 aagtgatggatggtggattaaaaaaaaaagaaaaaaagatgagggaaaagaggatgatat 3903
Query: 481 atggttcggcctggtgaatgtwatacttccccgagtcctaatwatwtwtcccttgagtga 540
||||||||||||||||||||| |||||||||||||||||||| || | ||||||||||||
Sbjct: 3904 atggttcggcctggtgaatgtaatacttccccgagtcctaataatatatcccttgagtga 3963
Query: 541 tgaagaactttgtccgttgaccttctgadaacctcatcaaawagatacctaactgtwcgt 600
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||
Sbjct: 3964 tgaagaactttgtccgttgaccttctgaaaacctcatcaaaaagatacctaactgtacgt 4023
Query: 601 ncncaawattacaagcattttwtctatnttggttgatatttttttttttttytcttgttt 660
| ||| || |||||||||| |||| | |||||| |||| | | ||||| ||||||||
Sbjct: 4024 acacaaaataacaagcatttaaactatataggttgaaatttatatatttttctcttgttt 4083
Query: 661 ttwtwwmtttcattttgamaaatcgaagaaaaagaaaaagaacttcgttctaaagtggaa 720
|| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4084 ttttttctttcattttgacaaatcgaagaaaaagaaaaagaacttcgttctaaagtggaa 4143
Query: 721 acttaatgagctttaagttagttcagctgaaatatactgactgamattcagaaaaactga 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4144 acttaatgagctttaagttagttcagctgaaatatactgactgacattcagaaaaactga 4203
Query: 781 aattgttctagttacaaaga 800
||||||||||||||||||||
Sbjct: 4204 aattgttctagttacaaaga 4223
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,006
Number of Sequences: 1807
Number of extensions: 14006
Number of successful extensions: 1507
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)